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BaseInfo

ncRNA ID	novel_gar_miR303
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr8:81931005-81931133 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029587;SRR1029588;SRR1029586
Length	21
Mature sequence(if miRNA)	1 - UGCAUUUGCACCUGCACCUUC - 21
Stem-loop(if miRNA)	--   A               ---------------------        --AA   -  U  U   G    C   U   UGC UUUGCACCUGCACCU                     UCUUGUUU    UUC UC GC UCA AAGC AAA G   ||| |||||||||||||||                     ||||||||    ||| || || ||| |||| |||   ACG GGACGUGGACGUGGA                     AGGAUAAG    AAG AG UG AGU UUUG UUU U CG   C               AUAAUAAUAAAAAACAAAAUC        AUAA   U  U  U   G    -   G
Stem-loop sequence	UGCAUUUGCACCUGCACCUUCUUGUUUAAUUCUCUGCUUCAGAAGCCAAAUGUGUUUGUUUGUGAUGUUGAUGAAAAUAGAAUAGGACUAAAACAAAAAAUAAUAAUAAGGUGCAGGUGCAGGCGCAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017766023.1	ncRNA:21   CUUCCACGUCCACGUUUACGU   1   |*||||||||||||||||||| targets:295   GCAGGUGCAGGUGCAAAUGCA   315 Target Full Sequence	0.0	PREDICTED: Gossypium arboreum uncharacterized LOC108465652 (LOC108465652), mRNA	uncharacterized LOC108465652(LOC108465652)	coding protein	psRNATarget
XM_017779126.1	ncRNA:21   CUUCCACGUCCACGUUUACGU   1   |*||||||*|||||||||||* targets:1078   GCAGGUGCUGGUGCAAAUGCC   1098 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum tetratricopeptide repeat protein 37 (LOC108476793), mRNA	tetratricopeptide repeat protein 37(LOC108476793)	coding protein	psRNATarget
XM_017773562.1	ncRNA:21   CUUCCACGUCCACGUUUACGU   1   **=||||*||||||||||||* targets:391   UCGGGUGAAGGUGCAAAUGCC   411 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum putative disease resistance protein At1g63350 (LOC108472038), mRNA	putative disease resistance protein At1g63350(LOC108472038)	coding protein	psRNATarget