ncRNA ID | novel_gar_miR292 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:49958018-49958099 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACACGGGCUGAGACACGGCUGUGU - 24 |
Stem-loop(if miRNA) |
--      GC  -   -    GCUGUGUGUCUCAAUUGUGUGG   ACACGG  UG AGA CACG                      G   ||||||  || ||| ||||   UGUGCC  GG UCG UGUG                      G GG      --  U   G    CGGACACACGAUUCCGGCACAG |
Stem-loop sequence | ACACGGGCUGAGACACGGCUGUGUGUCUCAAUUGUGUGGGGGACACGGCCUUAGCACACAGGCGUGUGGCUUGGCCGUGUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017753352.1 |
|
2.5 | PREDICTED: Gossypium arboreum protein DETOXIFICATION 54 (LOC108454780), mRNA | protein DETOXIFICATION 54(LOC108454780) | coding protein | psRNATarget |