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BaseInfo

ncRNA ID ath-miRf10969-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - ACUUGACCCCCUGGUCGAGUA - NA
Stem-loop(if miRNA)     C        CCC         AU  -  CUUCACUACUUCGCCUCAUC    GACCCCUUGGCCGAG
AGAC ACUUGACC   UGGUCGAGU  AG GA                    ACUC               U
|||| ||||||||   |||||||||  || ||                    ||||
UCUG UGAGCUGG   ACCAGCUCA  UC CU                    GCUC               A
    -        UCC         CU  A  -------------------A    ACUGAGAGCACCACC
Stem-loop sequence AGACCACUUGACCCCCUGGUCGAGUAUAGGACUUCACUACUUCGCCUCAUCACUCGACCCCUUGGCCGAGUACCACCACGAGAGUCACUCGAUCACUUCACUCGACCACCUGGUCGAGUGUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183311.1
ncRNA:21   AUGAGCUGGUCCCCCAGUUCA   1
  |||||||||||||||||=|||
targets:436   UACUCGACCAGGGGGUCGAGU   456

1.5 Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence NA coding protein psRNATarget