ncRNA ID | novel_gar_miR282 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:13066846-13066957 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCGGUACGUAUUCUAGUCGAGCA - 24 |
Stem-loop(if miRNA) |
--           C   -   U  U  U      U   UUCCU     --   U  AUA   UUCGAUUAGGA AUG AUC AU UG AUGUCC GGG     ACAGU  AUC GC   A   ||||||||||| ||| ||| || || |||||| |||     |||||  ||| ||   U   GAGCUGAUCUU UGC UGG UA AC UAUAGG CUC     UGUCG  UAG UG   U AC           A   A   C  U  C      -   ---UU     GU   U  GCU |
Stem-loop sequence | UUCGAUUAGGACAUGAUCUAUUUGUAUGUCCUGGGUUCCUACAGUAUCUGCAUAAUUUCGGUUGAUUGGCUGUUUCUCGGAUAUCCAUAUCGGUACGUAUUCUAGUCGAGCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017777009.1 |
|
1.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108474986 (LOC108474986), mRNA | uncharacterized LOC108474986(LOC108474986) | coding protein | psRNATarget |