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BaseInfo

ncRNA ID novel_gar_miR281
Species Gossypium arboreum
Class miRNA
Genome position Chr8:13192281-13192505 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587;SRR1029586
Length 24
Mature sequence(if miRNA) 202 - AACGGAAUUUGGCAUCUGCGAAAG - 225
Stem-loop(if miRNA) --   G        C     CGAAA   CUUCAAUAAAC  UAAGUUAAUAAGUAUUUUUUUCAACAGUUUAAGGAAUUUACUGAAUUGUUCGUUUGUGUGGUCUUUCCUUGUCGCAUU
  AAC GAAUUUGG AUCUG     GAG           GG                                                                              U
  ||| |||||||| |||||     |||           ||
  UUG CUUAGACU UAGAC     CUC           CG                                                                              G
AA   A        -     -UUAG   -----------  UUCUUUUAUACCAUUCGUUACCAUUCCAACUAUUCGUUCUAAACCAGUCAUUCCUUAUAUUUGGAGCACACGGUAUAG
Stem-loop sequence AACGGAAUUUGGCAUCUGCGAAAGAGCUUCAAUAAACGGUAAGUUAAUAAGUAUUUUUUUCAACAGUUUAAGGAAUUUACUGAAUUGUUCGUUUGUGUGGUCUUUCCUUGUCGCAUUUGGAUAUGGCACACGAGGUUUAUAUUCCUUACUGACCAAAUCUUGCUUAUCAACCUUACCAUUGCUUACCAUAUUUUCUUGCCUCGAUUCAGAUUCAGAUUCAGUUAA