ncRNA ID | novel_gar_miR281 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:13192281-13192505 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 202 - AACGGAAUUUGGCAUCUGCGAAAG - 225 |
Stem-loop(if miRNA) |
--   G        C     CGAAA   CUUCAAUAAAC  UAAGUUAAUAAGUAUUUUUUUCAACAGUUUAAGGAAUUUACUGAAUUGUUCGUUUGUGUGGUCUUUCCUUGUCGCAUU   AAC GAAUUUGG AUCUG     GAG           GG                                                                              U   ||| |||||||| |||||     |||           ||   UUG CUUAGACU UAGAC     CUC           CG                                                                              G AA   A        -     -UUAG   -----------  UUCUUUUAUACCAUUCGUUACCAUUCCAACUAUUCGUUCUAAACCAGUCAUUCCUUAUAUUUGGAGCACACGGUAUAG |
Stem-loop sequence | AACGGAAUUUGGCAUCUGCGAAAGAGCUUCAAUAAACGGUAAGUUAAUAAGUAUUUUUUUCAACAGUUUAAGGAAUUUACUGAAUUGUUCGUUUGUGUGGUCUUUCCUUGUCGCAUUUGGAUAUGGCACACGAGGUUUAUAUUCCUUACUGACCAAAUCUUGCUUAUCAACCUUACCAUUGCUUACCAUAUUUUCUUGCCUCGAUUCAGAUUCAGAUUCAGUUAA |