ncRNA ID | novel_gar_miR273 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:49824055-49824133 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029588;SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUAGGACCCAAGGAGGAUGCUGCU - 24 |
Stem-loop(if miRNA) |
--    -       G      ---  G   AA  UG A GAA   UAGC UCCUCCU GGGUCC   CA CGA  AU  G G   U   |||| ||||||| ||||||   || |||  ||  | |   G   GUCG AGGAGGA CCCAGG   GU GCU  UA  C C   G UC    U       A      AUG  A   -C  GU - AUA |
Stem-loop sequence | UAGCUCCUCCUGGGGUCCCAGCGAAAAUUGGAGGAAUGGAUACCUGAUCUCGAUGGUAGGACCCAAGGAGGAUGCUGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017765933.1 |
|
1.5 | PREDICTED: Gossypium arboreum protein EXORDIUM-like 4 (LOC108465577), mRNA | protein EXORDIUM-like 4(LOC108465577) | coding protein | psRNATarget |