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BaseInfo

ncRNA ID novel_gar_miR273
Species Gossypium arboreum
Class miRNA
Genome position Chr8:49824055-49824133 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587;SRR1029588;SRR1029586
Length 24
Mature sequence(if miRNA) 1 - GUAGGACCCAAGGAGGAUGCUGCU - 24
Stem-loop(if miRNA) --    -       G      ---  G   AA  UG A GAA
  UAGC UCCUCCU GGGUCC   CA CGA  AU  G G   U
  |||| ||||||| ||||||   || |||  ||  | |   G
  GUCG AGGAGGA CCCAGG   GU GCU  UA  C C   G
UC    U       A      AUG  A   -C  GU - AUA
Stem-loop sequence UAGCUCCUCCUGGGGUCCCAGCGAAAAUUGGAGGAAUGGAUACCUGAUCUCGAUGGUAGGACCCAAGGAGGAUGCUGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017765933.1
ncRNA:24   UCGUCGUAGGAGGAACCCAGGAUG   1
  *|||||||||||||*|||||||||
targets:795   CGCAGCAUCCUCCUCGGGUCCUAC   818

1.5 PREDICTED: Gossypium arboreum protein EXORDIUM-like 4 (LOC108465577), mRNA protein EXORDIUM-like 4(LOC108465577) coding protein psRNATarget