Search result

BaseInfo

ncRNA ID	ath-miRf10968-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UUGGUGUCGAUCGACACACA - NA
Stem-loop(if miRNA)	-- UG              A  A UG UG  GGUU        C G GGACUGGG  U  GUGUCGAUCGACAC CA U  A  UA    GACACUGU G G ||||||||  |  |||||||||||||| || |  |  ||    |||||||| | UCUGAUCU  G  CACAGCUAGCUGUG GU G  U  GU    CUGUGAUA C U         GU GU              -  C GU GU  ----        U U
Stem-loop sequence	GGACUGGGUUGGUGUCGAUCGACACACAAUUGAUGUAGGUUGACACUGUCGGGUUCUAUAGUGUCUGUGUUGGCUGGUGUCGAUCGACACUGGUGUCUAGUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ069810.1	ncRNA:20   ACACACAGCUAGCUGUGGUU   1   ||*||||||||||||||||= targets:334   UGGGUGUCGAUCGACACCAG   353 Target Full Sequence	2.0	Arabidopsis thaliana At2g13270 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183309.1	ncRNA:20   ACACACAGCUAGCUGUGGUU   1   *|*||||||||||||||||* targets:1332   AGAGUGUCGAUCGACACCAU   1351 Target Full Sequence	2.0	Arabidopsis thaliana clone asmbl_5245 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183308.1	ncRNA:20   ACACACAGCUAGCUGUGGUU   1   *|*||||||||||||||||* targets:1240   AGAGUGUCGAUCGACACCAU   1259 Target Full Sequence	2.0	Arabidopsis thaliana clone asmbl_5244 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_148282.1	ncRNA:20   ACACACAGCUAGCUGUGGUU   1   ||*||||||||=|||||||| targets:351   UGAGUGUCGAUUGACACCAA   370 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein partial mRNA	hypothetical protein(AT4G08097)	coding protein	psRNATarget