ncRNA ID | novel_gar_miR269 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr13:27617361-27617518 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 135 - AAAGGUCAUGGUCUUUAGUGGCGU - 158 |
Stem-loop(if miRNA) |
--          GU -    AUA       A     AGAAA     A         UG   GU          -G   GU   GCCGCUAAAG  C UGAU   UAGCGGC UUUUU     AAGCG CGCUAAAGG  AUG  CUUUAGCGGC  UUU  G   ||||||||||  | ||||   ||||||| |||||     ||||| |||||||||  |||  ||||||||||  |||   CGGUGAUUUC  G ACUG   AUCGCCG GAAAA     UUUGC GCGAUUUCU  UAC  GAAAUCGCCG  AAA  G UG          UG U    GAA       C     GGGGG     G         GG   UG          AG   AG |
Stem-loop sequence | GCCGCUAAAGGUCUGAUAUAUAGCGGCAUUUUUAGAAAAAGCGACGCUAAAGGUGAUGGUCUUUAGCGGCGUUUGUGGGAAAAGAGCCGCUAAAGGUCAUGGUCUUUAGCGGCGUUUGGGGGAAAAGCGCCGCUAAAGGUCAUGGUCUUUAGUGGCGU |