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BaseInfo

ncRNA ID novel_gar_miR269
Species Gossypium arboreum
Class miRNA
Genome position Chr13:27617361-27617518 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 135 - AAAGGUCAUGGUCUUUAGUGGCGU - 158
Stem-loop(if miRNA) --          GU -    AUA       A     AGAAA     A         UG   GU          -G   GU
  GCCGCUAAAG  C UGAU   UAGCGGC UUUUU     AAGCG CGCUAAAGG  AUG  CUUUAGCGGC  UUU  G
  ||||||||||  | ||||   ||||||| |||||     ||||| |||||||||  |||  ||||||||||  |||
  CGGUGAUUUC  G ACUG   AUCGCCG GAAAA     UUUGC GCGAUUUCU  UAC  GAAAUCGCCG  AAA  G
UG          UG U    GAA       C     GGGGG     G         GG   UG          AG   AG
Stem-loop sequence GCCGCUAAAGGUCUGAUAUAUAGCGGCAUUUUUAGAAAAAGCGACGCUAAAGGUGAUGGUCUUUAGCGGCGUUUGUGGGAAAAGAGCCGCUAAAGGUCAUGGUCUUUAGCGGCGUUUGGGGGAAAAGCGCCGCUAAAGGUCAUGGUCUUUAGUGGCGU