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BaseInfo

ncRNA ID novel_gar_miR263
Species Gossypium arboreum
Class miRNA
Genome position Chr8:71262643-71262817 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - AAUGGAUAGAGAUGACGUGAAAUC - 24
Stem-loop(if miRNA) --      A     C      C   CG    A     UG        A      CC     AG       --U    UCUCUUGAAAA
  UUUCAC UCAUC UUAUCU UUU  AAUA GAGAA  ACAAAUCA AUUUUU  UCUUG  AUUCAGC   UUUU           A
  |||||| ||||| |||||| |||  |||| |||||  |||||||| ||||||  |||||  |||||||   ||||           A
  AAAGUG AGUAG GAUAGG AAA  UUAU CUUUU  UGUUUAGU UAAAAA  AGGAC  UAAGUCG   AAAU           U
CU      C     A      U   AA    C     GU        C      AA     CA       UAA    CAACCUAUAUU
Stem-loop sequence UUUCACAUCAUCCUUAUCUCUUUCGAAUAAGAGAAUGACAAAUCAAAUUUUUCCUCUUGAGAUUCAGCUUUUUUCUCUUGAAAAAAUUUAUAUCCAACUAAAAAUGCUGAAUACCAGGAAAAAAAAUCUGAUUUGUUGUUUUCCUAUUAAAAAUGGAUAGAGAUGACGUGAAAUC