ncRNA ID | novel_gar_miR261 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:73936298-73936384 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029588;SRR3180719;SRR3180721;SRR1029586 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAGGGAAAGACUAGAUUCAUA - 21 |
Stem-loop(if miRNA) |
--            C          - -AUUAUU        CC   UGAAUCUAGUUU UCUCUUACUC C       CAUAUUUU  U   |||||||||||| |||||||||| |       ||||||||  U   ACUUAGAUCAGA AGGGAAUGAG G       GUAUAAAA  G AU            A          A AACUUCU        AU |
Stem-loop sequence | UGAAUCUAGUUUCUCUCUUACUCCAUUAUUCAUAUUUUCCUUGUAAAAAUAUGUCUUCAAGAGAGUAAGGGAAAGACUAGAUUCAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017751284.1 |
|
2.0 | PREDICTED: Gossypium arboreum ABC transporter B family member 1 (LOC108453275), mRNA | ABC transporter B family member 1(LOC108453275) | coding protein | psRNATarget | |||||||||
XM_017754025.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108455471 (LOC108455471), mRNA | uncharacterized LOC108455471(LOC108455471) | coding protein | psRNATarget |