ncRNA ID | novel_gar_miR259 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:74111649-74111749 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029586 |
Length | 21 |
Mature sequence(if miRNA) | 81 - UUGCUGGAUUAUGAGCCUAAU - 101 |
Stem-loop(if miRNA) |
--      GA       C     ---C     C    G  U  UAUU     A   UUGCUG  UUAUGAG CUAAU    UUUAU UCUU AU GU    UGGUU A   ||||||  ||||||| |||||    ||||| |||| || ||    ||||| A   AACGAC  AAUACUC GGUUA    GAAUG AGAA UA CG    ACCAG U GA      UG       A     AAAA     U    G  -  --UU     U |
Stem-loop sequence | UUGCUGGAUUAUGAGCCUAAUCUUUAUCUCUUGAUUGUUAUUUGGUUAAAUUGACCAUUGCAUGAAGAUGUAAGAAAAAUUGGACUCAUAAGUCAGCAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017782758.1 |
|
0.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108479909 (LOC108479909), mRNA | uncharacterized LOC108479909(LOC108479909) | coding protein | psRNATarget | |||||||||
XM_017779187.1 |
|
0.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108476830 (LOC108476830), mRNA | uncharacterized LOC108476830(LOC108476830) | coding protein | psRNATarget |