| ncRNA ID | novel_gar_miR258 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr13:58499159-58499340 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029586;SRR1029588;SRR3180719;SRR1029587 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AUUAGAAAGGGAUACAGAUGACGU - 24 |
| Stem-loop(if miRNA) |
-- C A U C C C AAAAA AAUUCAA GUCAUCUGUAUCCCUUUC AAUAGUUUUAUGCCA AUCA UA UUUUAUCUUGAAUUU AGGAUUUUAUC UGAA UCA A |||||||||||||||||| ||||||||||||||| |||| || ||||||||||||||| ||||||||||| |||| ||| U CAGUAGACAUAGGGAAAG UUAUCAAAAUACGGU UAGU AU AGAAUAGGACUUAAA UCCUAAAAUAG ACUU AGU U UG A G C A A A ---AA CAUAAAA |
| Stem-loop sequence | GUCAUCUGUAUCCCUUUCCAAUAGUUUUAUGCCAAAUCAUUACUUUUAUCUUGAAUUUCAGGAUUUUAUCCUGAAAAAAAUCAAAUUCAAAUUAAAAUACUGAAAUUCAAGAUAAAAUCCUAAAAUUCAGGAUAAGAAUACUGAUGUGGCAUAAAACUAUUAGAAAGGGAUACAGAUGACGU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017758885.1 |
|
1.5 | PREDICTED: Gossypium arboreum enolase-like (LOC108459500), mRNA | enolase-like(LOC108459500) | coding protein | psRNATarget | |||||||||
| XM_017759563.1 |
|
1.5 | PREDICTED: Gossypium arboreum L-type lectin-domain containing receptor kinase IX.1-like (LOC108460187), mRNA | L-type lectin-domain containing receptor kinase IX.1-like(LOC108460187) | coding protein | psRNATarget |