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BaseInfo

ncRNA ID novel_gar_miR253
Species Gossypium arboreum
Class miRNA
Genome position Chr8:91122062-91122286 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 202 - AAGGCGAGAUUUGAUAUUUGGCAA - 225
Stem-loop(if miRNA) --    C  G       -    --      U  C     C  GC         C    U   A        UU GC     AUA    A         CAAAAUUUCACUUAUG  U     AA
  AAGG GA AUUUGAU AUUU  GGCAAU CG GGAAU GU  CCUAACGUG UGGG UGC AUUUCGCG  U  UCAAA   AUCG AUAUCACUU                UC UUUAA  U
  |||| || ||||||| ||||  |||||| || ||||| ||  ||||||||| |||| ||| ||||||||  |  |||||   |||| |||||||||                || |||||
  UUCC CU UAAACUA UAAA  UCGUUA GC CUUUA CG  GGGUUGUGC AUCC GUG UAAGGUGU  A  GGUUU   UAGC UGUAGUGGA                AG AAAUU  C
AC    -  A       A    AU      -  U     A  UU         A    U   C        UU AA     --A    G         ----------------  C     CC
Stem-loop sequence AAGGCGAGAUUUGAUAUUUGGCAAUUCGCGGAAUCGUGCCCUAACGUGCUGGGUUGCAAUUUCGCGUUUGCUCAAAAUAAUCGAAUAUCACUUCAAAAUUUCACUUAUGUCUUUUAAAAUCCCUUAAACGAAGGUGAUGUGCGAUAUUUGGAAAUUUGUGGAAUCGUGUCCUAACGUGUUGGGUUGCAAUUUCUCGAUUGCUUAAAAUAAUCAAAUAUCCCUUCA