ncRNA ID | novel_gar_miR253 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:91122062-91122286 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 202 - AAGGCGAGAUUUGAUAUUUGGCAA - 225 |
Stem-loop(if miRNA) |
--    C  G       -    --      U  C     C  GC         C    U   A        UU GC     AUA    A         CAAAAUUUCACUUAUG  U     AA   AAGG GA AUUUGAU AUUU  GGCAAU CG GGAAU GU  CCUAACGUG UGGG UGC AUUUCGCG  U  UCAAA   AUCG AUAUCACUU                UC UUUAA  U   |||| || ||||||| ||||  |||||| || ||||| ||  ||||||||| |||| ||| ||||||||  |  |||||   |||| |||||||||                || |||||   UUCC CU UAAACUA UAAA  UCGUUA GC CUUUA CG  GGGUUGUGC AUCC GUG UAAGGUGU  A  GGUUU   UAGC UGUAGUGGA                AG AAAUU  C AC    -  A       A    AU      -  U     A  UU         A    U   C        UU AA     --A    G         ----------------  C     CC |
Stem-loop sequence | AAGGCGAGAUUUGAUAUUUGGCAAUUCGCGGAAUCGUGCCCUAACGUGCUGGGUUGCAAUUUCGCGUUUGCUCAAAAUAAUCGAAUAUCACUUCAAAAUUUCACUUAUGUCUUUUAAAAUCCCUUAAACGAAGGUGAUGUGCGAUAUUUGGAAAUUUGUGGAAUCGUGUCCUAACGUGUUGGGUUGCAAUUUCUCGAUUGCUUAAAAUAAUCAAAUAUCCCUUCA |