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BaseInfo

ncRNA ID novel_gar_miR252
Species Gossypium arboreum
Class miRNA
Genome position Chr8:91137055-91137279 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 202 - AAGGCGAGAUUUGAUAUUUGGCAA - 225
Stem-loop(if miRNA) --    C  G       -    --      U  C     C  GC         C    UU  A      C -U    U    AUA    A       -   AAAAUUUC  UUAUGUAUUU
  AAGG GA AUUUGAU AUUU  GGCAAU CG GGAAU GU  CCUAACGUG UGGG  GC AUUUCG G  UUGC CAAA   AUUG AUAUCAC UUC        AC          U
  |||| || ||||||| ||||  |||||| || ||||| ||  ||||||||| ||||  || |||||| |  |||| ||||   |||| ||||||| |||        ||
  UUCC CU UAAACUA UAAA  UCGUUA GC CUUUA CG  GGGUUGUAC AUCC  UG UAAGGU C  AACG GUUU   UAGC UGUAGUG AAG        AA          A
AC    -  A       A    AU      -  U     A  UU         A    CG  C      A UU    -    --A    G       G   -------C  AUUCCCUAAA
Stem-loop sequence AAGGCGAGAUUUGAUAUUUGGCAAUUCGCGGAAUCGUGCCCUAACGUGCUGGGUUGCAAUUUCGCGUUUGCUCAAAAUAAUUGAAUAUCACUUCAAAAUUUCACUUAUGUAUUUUAAAAUCCCUUAAACGAAGGUGAUGUGCGAUAUUUGGCAAUUCAUGGAAUCGUGCCCUAACAUGUUGGGUUGCAAUUUCUCGAUUGCUUAAAAUAAUCAAAUAUCCCUUCA