ncRNA ID | novel_gar_miR252 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:91137055-91137279 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 202 - AAGGCGAGAUUUGAUAUUUGGCAA - 225 |
Stem-loop(if miRNA) |
--    C  G       -    --      U  C     C  GC         C    UU  A      C -U    U    AUA    A       -   AAAAUUUC  UUAUGUAUUU   AAGG GA AUUUGAU AUUU  GGCAAU CG GGAAU GU  CCUAACGUG UGGG  GC AUUUCG G  UUGC CAAA   AUUG AUAUCAC UUC        AC          U   |||| || ||||||| ||||  |||||| || ||||| ||  ||||||||| ||||  || |||||| |  |||| ||||   |||| ||||||| |||        ||   UUCC CU UAAACUA UAAA  UCGUUA GC CUUUA CG  GGGUUGUAC AUCC  UG UAAGGU C  AACG GUUU   UAGC UGUAGUG AAG        AA          A AC    -  A       A    AU      -  U     A  UU         A    CG  C      A UU    -    --A    G       G   -------C  AUUCCCUAAA |
Stem-loop sequence | AAGGCGAGAUUUGAUAUUUGGCAAUUCGCGGAAUCGUGCCCUAACGUGCUGGGUUGCAAUUUCGCGUUUGCUCAAAAUAAUUGAAUAUCACUUCAAAAUUUCACUUAUGUAUUUUAAAAUCCCUUAAACGAAGGUGAUGUGCGAUAUUUGGCAAUUCAUGGAAUCGUGCCCUAACAUGUUGGGUUGCAAUUUCUCGAUUGCUUAAAAUAAUCAAAUAUCCCUUCA |