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BaseInfo

ncRNA ID novel_gar_miR243
Species Gossypium arboreum
Class miRNA
Genome position Chr8:121266820-121267037 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 195 - UAGGGCUUAGAAGCAGUUAAGCUG - 218
Stem-loop(if miRNA) ---U                    CUGAG            GCC          C       AC    G       CCAUAAACA    A      -   CU         GUAUU
    AGGGCUUAGAAGCAGUUAAG     GUGGUUGAAAUG   AGAGAGAAAA GCUCCCU  AGGG GCGUUUU         UGUC GACAUG UGG  UGAAAACGC     G
    ||||||||||||||||||||     ||||||||||||   |||||||||| |||||||  |||| |||||||         |||| |||||| |||  |||||||||
    UUCCGAGUUUUCGUUAAUUC     CACCAACUUUAC   UCUCUCUUUU CGAGGGA  UUCC CGUAAAA         AUAG UUGUGC AUC  ACUUUUGUG     U
ACGU                    -AAAA            GAA          A       CA    A       ---------    A      U   --         AAGGA
Stem-loop sequence UAGGGCUUAGAAGCAGUUAAGCUGAGGUGGUUGAAAUGGCCAGAGAGAAAACGCUCCCUACAGGGGGCGUUUUCCAUAAACAUGUCAGACAUGUGGCUUGAAAACGCGUAUUGUAGGAAGUGUUUUCACUAUCGUGUUAGAUAAAAAUGCACCUUACAGGGAGCAUUUUCUCUCUAAGCAUUUCAACCACAAAACUUAAUUGCUUUUGAGCCUUUGCA