ncRNA ID | novel_gar_miR243 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:121266820-121267037 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 195 - UAGGGCUUAGAAGCAGUUAAGCUG - 218 |
Stem-loop(if miRNA) |
---U                    CUGAG            GCC          C       AC    G       CCAUAAACA    A      -   CU         GUAUU     AGGGCUUAGAAGCAGUUAAG     GUGGUUGAAAUG   AGAGAGAAAA GCUCCCU  AGGG GCGUUUU         UGUC GACAUG UGG  UGAAAACGC     G     ||||||||||||||||||||     ||||||||||||   |||||||||| |||||||  |||| |||||||         |||| |||||| |||  |||||||||     UUCCGAGUUUUCGUUAAUUC     CACCAACUUUAC   UCUCUCUUUU CGAGGGA  UUCC CGUAAAA         AUAG UUGUGC AUC  ACUUUUGUG     U ACGU                    -AAAA            GAA          A       CA    A       ---------    A      U   --         AAGGA |
Stem-loop sequence | UAGGGCUUAGAAGCAGUUAAGCUGAGGUGGUUGAAAUGGCCAGAGAGAAAACGCUCCCUACAGGGGGCGUUUUCCAUAAACAUGUCAGACAUGUGGCUUGAAAACGCGUAUUGUAGGAAGUGUUUUCACUAUCGUGUUAGAUAAAAAUGCACCUUACAGGGAGCAUUUUCUCUCUAAGCAUUUCAACCACAAAACUUAAUUGCUUUUGAGCCUUUGCA |