ncRNA ID | novel_gar_miR236 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:14385733-14385804 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586;SRR3180719;SRR3180721 |
Length | 21 |
Mature sequence(if miRNA) | 52 - UCGGAGCGGCCGGUCUUGUCA - 72 |
Stem-loop(if miRNA) |
--      C  CC       U    - C   UG      UCGGAG GG  GGUCUUG CAUC C UUU  CCCA   |||||| ||  ||||||| |||| | |||  |||U   AGCUUC UC  CUAGGAC GUAG G GGG  GGGU GU      U  AA       U    A U   GU    |
Stem-loop sequence | UCGGAGCGGCCGGUCUUGUCAUCCCUUUUGCCCAUUGGGUGGGGUGAGAUGUCAGGAUCAACUUCUUCGAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017753790.1 |
|
0.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108455200 (LOC108455200), mRNA | uncharacterized LOC108455200(LOC108455200) | coding protein | psRNATarget | |||||||||
XM_017753787.1 |
|
0.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108455194 (LOC108455194), mRNA | uncharacterized LOC108455194(LOC108455194) | coding protein | psRNATarget |