ncRNA ID | novel_gar_miR230 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr8:96733127-96733189 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 40 - CUUUGUGCUGACGUGGACAAAACA - 63 |
Stem-loop(if miRNA) |
--UUUA      A           C   -  U       GUCUAC UCAGCACAAAG GCU CC U       |||||| ||||||||||| ||| ||       CAGGUG AGUCGUGUUUC CGA GG A ACAAAA      C           U   A  A |
Stem-loop sequence | UUUAGUCUACAUCAGCACAAAGCGCUCCUUAAGGAAGCUCUUUGUGCUGACGUGGACAAAACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017784438.1 |
|
1.5 | PREDICTED: Gossypium arboreum serine/threonine-protein phosphatase 7 long form homolog (LOC108481281), mRNA | serine/threonine-protein phosphatase 7 long form homolog(LOC108481281) | coding protein | psRNATarget | |||||||||
XM_017780527.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108478102 (LOC108478102), mRNA | uncharacterized LOC108478102(LOC108478102) | coding protein | psRNATarget |