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BaseInfo

ncRNA ID novel_gar_miR215
Species Gossypium arboreum
Class miRNA
Genome position Chr7:46966198-46966378 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 158 - GUAUCUGGGUUACCAGUGUCGGCA - 181
Stem-loop(if miRNA) --  A  U            -  UG   CGAGA    UCUGA         ---AA    -    AUAUG   ACAAGUGAAAGCGGAACAUCAAGU
  CC AU UUGGUGGCCCGG UA  AAA     CAUU     AUUUGUUUC     GGUG UCUG     UCA                        G
  || || |||||||||||| ||  |||     ||||     |||||||||     |||| ||||     |||
  GG UG GACCAUUGGGUC AU  UUU     GUAA     UGAGCAAGG     GGUA GUCC     AGU                        C
AC  C  U            U  GU   ---AG    --CAG         GUAAA    A    ---AU   ACUAAUCGACUUCAUUAGGGCUAC
Stem-loop sequence CCAAUUUUGGUGGCCCGGUAUGAAACGAGACAUUUCUGAAUUUGUUUCAAGGUGUCUGAUAUGUCAACAAGUGAAAGCGGAACAUCAAGUGCCAUCGGGAUUACUUCAGCUAAUCAUGAUACCUGAAUGGAAAUGGGAACGAGUGACAAUGGAUUUUGUAUCUGGGUUACCAGUGUCGGCA