ncRNA ID | novel_gar_miR215 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr7:46966198-46966378 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 158 - GUAUCUGGGUUACCAGUGUCGGCA - 181 |
Stem-loop(if miRNA) |
--  A  U            -  UG   CGAGA    UCUGA         ---AA    -    AUAUG   ACAAGUGAAAGCGGAACAUCAAGU   CC AU UUGGUGGCCCGG UA  AAA     CAUU     AUUUGUUUC     GGUG UCUG     UCA                        G   || || |||||||||||| ||  |||     ||||     |||||||||     |||| ||||     |||   GG UG GACCAUUGGGUC AU  UUU     GUAA     UGAGCAAGG     GGUA GUCC     AGU                        C AC  C  U            U  GU   ---AG    --CAG         GUAAA    A    ---AU   ACUAAUCGACUUCAUUAGGGCUAC |
Stem-loop sequence | CCAAUUUUGGUGGCCCGGUAUGAAACGAGACAUUUCUGAAUUUGUUUCAAGGUGUCUGAUAUGUCAACAAGUGAAAGCGGAACAUCAAGUGCCAUCGGGAUUACUUCAGCUAAUCAUGAUACCUGAAUGGAAAUGGGAACGAGUGACAAUGGAUUUUGUAUCUGGGUUACCAGUGUCGGCA |