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BaseInfo

ncRNA ID ath-miRf10962-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - GGUUACUCGACCUGGGGGUCGAGU - NA
Stem-loop(if miRNA)   U     -    --U          GG         -  GUG   AGA
CC GAGCU GAGG   UACUCGACCU  GGGUCGAGU AU   GGA   A
|| ||||| ||||   ||||||||||  ||||||||| ||   |||
GG CUUGG CUUC   AUGAGCUGGG  UCCAGCUCA UG   CCU   U
  U     U    UGU          GG         C  AAA   CGG
Stem-loop sequence CCUGAGCUGAGGUUACUCGACCUGGGGGUCGAGUAUGUGGGAAGAAUGGCUCCAAAGUCACUCGACCUGGGGGUCGAGUAUGUCUUCUGGUUCUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT025674.1
ncRNA:24   UGAGCUGGGGGUCCAGCUCAUUGG   1
  ||||||||||||||||||||||||
targets:189   ACUCGACCCCCAGGUCGAGUAACC   212

0.0 Arabidopsis thaliana NA coding protein psRNATarget
BT014714.1
ncRNA:24   UGAGCUGGGGGUCCAGCUCAUUGG   1
  ||||||||||||||||||||=||=
targets:138   ACUCGACCCCCAGGUCGAGUGACU   161

2.5 Arabidopsis thaliana At4g05636.1 mRNA sequence NA coding protein psRNATarget
BT015478.1
ncRNA:24   UGAGCUGGGGGUCCAGCUCAUUGG   1
  ||||||||||||||||||||=||=
targets:138   ACUCGACCCCCAGGUCGAGUGACU   161

2.5 Arabidopsis thaliana At4g05636 mRNA sequence NA coding protein psRNATarget