ncRNA ID | novel_gar_miR200 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr7:23694778-23694866 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 66 - AAGGUUUAACUGAAGAUGAGCGCU - 89 |
Stem-loop(if miRNA) |
--     UU       ---        CUAUCA   A   AG   AAU   AAGGU  AACUGAA   GAUGAGCG      UGC UUG  UGA   U   |||||  |||||||   ||||||||      ||| |||  |||   C   UUCCA  UUGAUUU   UUACUCGU      ACG AAU  ACU   C UC     -U       UUU        ----AA   C   CU   AGA |
Stem-loop sequence | AAGGUUUAACUGAAGAUGAGCGCUAUCAUGCAUUGAGUGAAAUUCCAGAUCAUCUAACGCAAAUGCUCAUUUUUUUUAGUUUACCUUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017758769.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108459406 (LOC108459406), mRNA | uncharacterized LOC108459406(LOC108459406) | coding protein | psRNATarget |