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BaseInfo

ncRNA ID novel_gar_miR188
Species Gossypium arboreum
Class miRNA
Genome position Chr7:53524425-53524472 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587;SRR1029588
Length 22
Mature sequence(if miRNA) 1 - AUGCUAGAACUUGAUUUUGCAG - 22
Stem-loop(if miRNA) -- A     UG   --    U  UA
  G AGGAU  AGU  UAGU UU  U
  | |||||  |||  |||| ||
  C UUUUA  UCA  AUCG AG  A
GA G     GU   AG    U  UA
Stem-loop sequence GAAGGAUUGAGUUAGUUUUUAUAAUGAUGCUAGAACUUGAUUUUGCAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017759164.1
ncRNA:22   GACGUUUUAGUUCAAGAUCGUA   1
  |**|||||||*||||||||||*
targets:1128   CCACAAAAUCUAGUUCUAGCAA   1149

2.5 PREDICTED: Gossypium arboreum zinc finger protein ZAT4-like (LOC108459760), mRNA zinc finger protein ZAT4-like(LOC108459760) coding protein psRNATarget