ncRNA ID | novel_gar_miR188 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr7:53524425-53524472 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029588 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AUGCUAGAACUUGAUUUUGCAG - 22 |
Stem-loop(if miRNA) |
-- A     UG   --    U  UA   G AGGAU  AGU  UAGU UU  U   | |||||  |||  |||| ||   C UUUUA  UCA  AUCG AG  A GA G     GU   AG    U  UA |
Stem-loop sequence | GAAGGAUUGAGUUAGUUUUUAUAAUGAUGCUAGAACUUGAUUUUGCAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017759164.1 |
|
2.5 | PREDICTED: Gossypium arboreum zinc finger protein ZAT4-like (LOC108459760), mRNA | zinc finger protein ZAT4-like(LOC108459760) | coding protein | psRNATarget |