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BaseInfo

ncRNA ID	novel_gar_miR184
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr7:67515130-67515242 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029587;SRR1029588;SRR1029586
Length	24
Mature sequence(if miRNA)	90 - AUUUGUACUGUUAAAAACUGGCAU - 113
Stem-loop(if miRNA)	--    G A              - ----A    UG  -------  AAUAACCAAACAUUG   AUUU U CUGUUAAAAACUGG C     UGGU  AU       GG               A   |||| | |||||||||||||| |     ||||  ||       ||               C   UAAA A GACAAUUUUUGAUC G     GCCA  UG       UG               A GG    G C              A GUACA    GU  AACUCCA  UGUACUGUGCGGUUC
Stem-loop sequence	AUUUGUACUGUUAAAAACUGGCAUGGUUGAUGGAAUAACCAAACAUUGACACUUGGCGUGUCAUGUGUACCUCAAGUUGACCGACAUGGACUAGUUUUUAACAGCAGAAAUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017777482.1	ncRNA:24   UACGGUCAAAAAUUGUCAUGUUUA   1   |*|==|*||||||||||||||||| targets:33   AAGUUAAUUUUUAACAGUACAAAU   56 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108475513 (LOC108475513), mRNA	uncharacterized LOC108475513(LOC108475513)	coding protein	psRNATarget
XM_017769062.1	ncRNA:24   UA---CGGUCAAAAAUUGUCAUGUUUA   1   ||---|==||||||||||||||*|||| targets:1576   AUAGGGUUAGUUUUUAACAGUAAAAAU   1602 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum uncharacterized LOC108468182 (LOC108468182), mRNA	uncharacterized LOC108468182(LOC108468182)	coding protein	psRNATarget
XM_017754697.1	ncRNA:24   UACGGUCAAAAAUUGUCAUGUUUA   1   ||||||*|||||||=||||||||| targets:1504   AUGCCAAUUUUUAAUAGUACAAAU   1527 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum uncharacterized protein DDB_G0271670 (LOC108456101), transcript variant X2, mRNA	uncharacterized protein DDB_G0271670(LOC108456101)	coding protein	psRNATarget
XM_017754696.1	ncRNA:24   UACGGUCAAAAAUUGUCAUGUUUA   1   ||||||*|||||||=||||||||| targets:1504   AUGCCAAUUUUUAAUAGUACAAAU   1527 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum uncharacterized protein DDB_G0271670 (LOC108456101), transcript variant X1, mRNA	uncharacterized protein DDB_G0271670(LOC108456101)	coding protein	psRNATarget
XM_017783891.1	ncRNA:24   UACGGUCAAAAAUUGUCAUGUUUA   1   |**|=|*||||||||=|||||||| targets:901   AGACUAAUUUUUAACGGUACAAAU   924 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum nudix hydrolase 25 (LOC108480791), mRNA	nudix hydrolase 25(LOC108480791)	coding protein	psRNATarget
XM_017769675.1	ncRNA:24   UAC--------GGUCAAAAAUUGUCAUGUUUA   1   |||--------|||*||||||||||||*|||| targets:1050   AUGUACAAGGACCAAUUUUUAACAGUAGAAAU   1081 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum uncharacterized LOC108468815 (LOC108468815), transcript variant X1, mRNA	uncharacterized LOC108468815(LOC108468815)	coding protein	psRNATarget
XM_017769676.1	ncRNA:24   UAC--------GGUCAAAAAUUGUCAUGUUUA   1   |||--------|||*||||||||||||*|||| targets:1050   AUGUACAAGGACCAAUUUUUAACAGUAGAAAU   1081 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum uncharacterized LOC108468815 (LOC108468815), transcript variant X2, mRNA	uncharacterized LOC108468815(LOC108468815)	coding protein	psRNATarget
XM_017792872.1	ncRNA:23   ACGGUCAAAAAUUGUCAUGUUUA   1   **|=|*||||||||||||*|||| targets:1   GACUAAUUUUUAACAGUAGAAAU   23 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum senescence-associated carboxylesterase 101-like (LOC108488581), mRNA	senescence-associated carboxylesterase 101-like(LOC108488581)	coding protein	psRNATarget