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BaseInfo

ncRNA ID	novel_gar_miR169
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr1:18940811-18940856 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029586;SRR1029588;SRR1029587
Length	22
Mature sequence(if miRNA)	1 - GGAAUGUUGUCUGGCUCGAGGA - 22
Stem-loop(if miRNA)	---C     G AG    CA    G     UGAGC G  UAAC  AUUU A     ||||| |  ||||  |||| G     GCUCG U  GUUG  UAAG G AGGA     G CU    --    G
Stem-loop sequence	CUGAGCGGAGUAACCAAUUUGAGGGGAAUGUUGUCUGGCUCGAGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017772806.1	ncRNA:22   AGGAGCUCGGUCUGUUGUAAGG   1   *==|=||||||*|||||||||| targets:996   CUUUUGAGCCAUACAACAUUCC   1017 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum L10-interacting MYB domain-containing protein-like (LOC108471198), mRNA	L10-interacting MYB domain-containing protein-like(LOC108471198)	coding protein	psRNATarget
XM_017749617.1	ncRNA:22   AGGAGCUCGGUCUGUUGUAAGG   1   |==||*|**||||||||||||| targets:269   UUUUCAACACAGACAACAUUCC   290 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum DNA polymerase zeta processivity subunit (LOC108451912), transcript variant X2, mRNA	DNA polymerase zeta processivity subunit(LOC108451912)	coding protein	psRNATarget
XM_017749616.1	ncRNA:22   AGGAGCUCGGUCUGUUGUAAGG   1   |==||*|**||||||||||||| targets:305   UUUUCAACACAGACAACAUUCC   326 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum DNA polymerase zeta processivity subunit (LOC108451912), transcript variant X1, mRNA	DNA polymerase zeta processivity subunit(LOC108451912)	coding protein	psRNATarget