ncRNA ID | novel_gar_miR168 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr7:114914642-114914844 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUCAUAAUUAGGUGAGCAGAACAG - 24 |
Stem-loop(if miRNA) |
-UUUUUA  -                            U   -   AUA               CUUCUUC            -     A  AACAUAAAAAC  AA        GC CAUUUAAUUGUGAAAAGUUGCAAAAUAG CAC CGA   AUUCGAUUUUGUCUU       UUUUUUGUCAUC AACUG CU           AG  A        || |||||||||||||||||||||||||||| ||| |||   |||||||||||||||       |||||||||||| ||||| ||           ||        CG GUGGAUUAAUACUUUUCAAUGUUUUAUC GUG GUU   UAAGUUAAAACAGAA       AAAAAAUAGUGG UUGAU GA           UC  G GACAAGA  A                            C   A   -GA               -------            G     A  -AUAUAAAAAA  CA |
Stem-loop sequence | UUUUUAGCCAUUUAAUUGUGAAAAGUUGCAAAAUAGUCACCGAAUAAUUCGAUUUUGUCUUCUUCUUCUUUUUUGUCAUCAACUGACUAACAUAAAAACAGAAAGACCUAAAAAAUAUAAGAUAGUUGGGUGAUAAAAAAAAGACAAAAUUGAAUAGUUGAGUGCCUAUUUUGUAACUUUUCAUAAUUAGGUGAGCAGAACAG |