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BaseInfo

ncRNA ID novel_gar_miR168
Species Gossypium arboreum
Class miRNA
Genome position Chr7:114914642-114914844 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - UUCAUAAUUAGGUGAGCAGAACAG - 24
Stem-loop(if miRNA) -UUUUUA  -                            U   -   AUA               CUUCUUC            -     A  AACAUAAAAAC  AA
       GC CAUUUAAUUGUGAAAAGUUGCAAAAUAG CAC CGA   AUUCGAUUUUGUCUU       UUUUUUGUCAUC AACUG CU           AG  A
       || |||||||||||||||||||||||||||| ||| |||   |||||||||||||||       |||||||||||| ||||| ||           ||
       CG GUGGAUUAAUACUUUUCAAUGUUUUAUC GUG GUU   UAAGUUAAAACAGAA       AAAAAAUAGUGG UUGAU GA           UC  G
GACAAGA  A                            C   A   -GA               -------            G     A  -AUAUAAAAAA  CA
Stem-loop sequence UUUUUAGCCAUUUAAUUGUGAAAAGUUGCAAAAUAGUCACCGAAUAAUUCGAUUUUGUCUUCUUCUUCUUUUUUGUCAUCAACUGACUAACAUAAAAACAGAAAGACCUAAAAAAUAUAAGAUAGUUGGGUGAUAAAAAAAAGACAAAAUUGAAUAGUUGAGUGCCUAUUUUGUAACUUUUCAUAAUUAGGUGAGCAGAACAG