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BaseInfo

ncRNA ID novel_gar_miR159
Species Gossypium arboreum
Class miRNA
Genome position Chr7:114695946-114696099 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 21
Mature sequence(if miRNA) 1 - CCGCUCACAGAAAAGUCUGCG - 21
Stem-loop(if miRNA) --CC              C       C  -----G   ---C    A         -----     UU  AA  --       U
    GCUCACAGAAAAGU UGCGAAG GU      GUU    GUGC UUUUGAGGA     AUAGG  CA  UC  CCACCAG U
    |||||||||||||| ||||||| ||      |||    |||| |||||||||     |||||  ||  ||  ||||||| U
    CGAGUGUCUUUUCA ACGUUUC CA      CAG    UACG GAAACUCCU     UAUCC  GU  AG  GGUGGUU C
GAGA              A       A  GAUUUA   UAUA    G         GUUCC     UC  GG  UC       C
Stem-loop sequence CCGCUCACAGAAAAGUCUGCGAAGCGUGGUUCGUGCAUUUUGAGGAAUAGGUUCAAAUCCCACCAGUUUCCUUGGUGGCUGAGGUGCUCCUAUCCUUGUCCUCAAAGGGCAUAUAUGACAUUUAGACACUUUGCAAACUUUUCUGUGAGCAGAG