ncRNA ID | novel_gar_miR138 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:45939009-45939150 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029588;SRR3180720;SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GGAAUGUUGUCUGGACCGGGGACA - 24 |
Stem-loop(if miRNA) |
--      UU      A    G      U   --U UC         ----UUCCCU       ---U     GG   GGAAUG  GUCUGG CCGG GACACU GUG   U  UAAUCCAUU          GCAAUAU    GUUCU  C   ||||||  |||||| |||| |||||| |||   |  |||||||||          |||||||    |||||  C   CCUUAC  CGGACC GGCU CUGUGA CAU   G  AUUAGGUAA          CGUUAUA    UAGGG  A CC      UU      A    G      U   GUU GA         UGUUUUUAUU       UUUC     GU |
Stem-loop sequence | GGAAUGUUGUCUGGACCGGGGACACUUGUGUUUCUAAUCCAUUUUCCCUGCAAUAUUGUUCUGGCCAUGGGGAUCUUUAUAUUGCUUAUUUUUGUAAUGGAUUAAGGUUGUACUAGUGUCGUCGGACCAGGCUUCAUUCCCC |