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BaseInfo

ncRNA ID novel_gar_miR138
Species Gossypium arboreum
Class miRNA
Genome position Chr6:45939009-45939150 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587;SRR1029588;SRR3180720;SRR1029586
Length 24
Mature sequence(if miRNA) 1 - GGAAUGUUGUCUGGACCGGGGACA - 24
Stem-loop(if miRNA) --      UU      A    G      U   --U UC         ----UUCCCU       ---U     GG
  GGAAUG  GUCUGG CCGG GACACU GUG   U  UAAUCCAUU          GCAAUAU    GUUCU  C
  ||||||  |||||| |||| |||||| |||   |  |||||||||          |||||||    |||||  C
  CCUUAC  CGGACC GGCU CUGUGA CAU   G  AUUAGGUAA          CGUUAUA    UAGGG  A
CC      UU      A    G      U   GUU GA         UGUUUUUAUU       UUUC     GU
Stem-loop sequence GGAAUGUUGUCUGGACCGGGGACACUUGUGUUUCUAAUCCAUUUUCCCUGCAAUAUUGUUCUGGCCAUGGGGAUCUUUAUAUUGCUUAUUUUUGUAAUGGAUUAAGGUUGUACUAGUGUCGUCGGACCAGGCUUCAUUCCCC