ncRNA ID | novel_gar_miR134 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:3495256-3495338 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CGGCUGUCUGUAUAUGGUCGAA - 22 |
Stem-loop(if miRNA) |
--U     C  A     G    --UG  AUGGAGAAUAGAUUU    GAUUA UA AUAGA AGCU    UC               C    ||||| || ||||| ||||    ||    CUGGU AU UGUCU UCGG    AC               U AAG     -  A     G    CGUA  AGGAGGUGAAGUAGU |
Stem-loop sequence | UGAUUACUAAAUAGAGAGCUUGUCAUGGAGAAUAGAUUUCUUGAUGAAGUGGAGGACAAUGCGGCUGUCUGUAUAUGGUCGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017794441.1 |
|
3.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108489730 (LOC108489730), mRNA | uncharacterized LOC108489730(LOC108489730) | coding protein | psRNATarget |