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BaseInfo

ncRNA ID novel_gar_miR118
Species Gossypium arboreum
Class miRNA
Genome position Chr1:92635271-92635331 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - AAAGAUCAUGGUCUUUAGUGGCGU - 24
Stem-loop(if miRNA) --          GU         C    GC
  AAAGAUCAUG  CUUUAGUGG GUUU  G
  ||||||||||  ||||||||| ||||  A
  UUUCUGGUAC  GAAAUCACC CGAA  A
GA          UU         U    AA
Stem-loop sequence AAAGAUCAUGGUCUUUAGUGGCGUUUGCGAAAAAAGCUCCACUAAAGUUCAUGGUCUUUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017768165.1
ncRNA:24   UGCGGUGAUUUCUGGUACUAGAAA   1
  |||||||||*|||*||||||||||
targets:1373   ACGCCACUAUAGAACAUGAUCUUU   1396

2.5 PREDICTED: Gossypium arboreum diphthamide biosynthesis protein 2-like (LOC108467522), mRNA diphthamide biosynthesis protein 2-like(LOC108467522) coding protein psRNATarget