ncRNA ID | novel_gar_miR118 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:92635271-92635331 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAGAUCAUGGUCUUUAGUGGCGU - 24 |
Stem-loop(if miRNA) |
--          GU         C    GC   AAAGAUCAUG  CUUUAGUGG GUUU  G   ||||||||||  ||||||||| ||||  A   UUUCUGGUAC  GAAAUCACC CGAA  A GA          UU         U    AA |
Stem-loop sequence | AAAGAUCAUGGUCUUUAGUGGCGUUUGCGAAAAAAGCUCCACUAAAGUUCAUGGUCUUUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017768165.1 |
|
2.5 | PREDICTED: Gossypium arboreum diphthamide biosynthesis protein 2-like (LOC108467522), mRNA | diphthamide biosynthesis protein 2-like(LOC108467522) | coding protein | psRNATarget |