Search result

BaseInfo

ncRNA ID	ath-miRf10952-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - UACUCGACUUGGUGGUCGAGUGGUC - NA
Stem-loop(if miRNA)	-UU          UG U          UCU   GAGG AUGUC   CUACUCGACU  G GGUCGAGUGG   GUU    U |||||   ||||||||||  | ||||||||||   ||| UACGG   GGUGAGCUGG  C CCAGCUCAUC   CGA    C      UUU          GA U          -UU   AGUU
Stem-loop sequence	AUGUCUUCUACUCGACUUGGUGGUCGAGUGGUCUGUUGAGGUCUUGAAGCUUCUACUCGACCUCAGGGUCGAGUGGUUUGGCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183192.1	ncRNA:25   CUGGUGAGCUGGUGGUUCAGCUCAU   1   *|=|||||*|||||||||||||||| targets:654   AAUCACUCUACCACCAAGUCGAGUA   678 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:25   CUGGUGAGCUGGUGGUUCAGCUCAU   1   *|=|||||*|||||||||||||||| targets:1029   AAUCACUCUACCACCAAGUCGAGUA   1053 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:25   CUGGUGAGCUGGUGGUUCAGCUCAU   1   *|||||||||||||||=|||||||| targets:447   AACCACUCGACCACCAGGUCGAGUA   471 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:25   CUGGUGAGCUGGUGGUUCAGCUCAU   1   *|=|||||*|||||||||||||||* targets:1029   AAUCACUCUACCACCAAGUCGAGUC   1053 Target Full Sequence	2.0	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:25   CUGGUGAGCUGGUGGUUCAGCUCAU   1   |||||||||||*||||=|||||||| targets:806   GACCACUCGACAACCAGGUCGAGUA   830 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:25   CUGGUGAGCUGGUGGUUCAGCUCAU   1   *|=|||||*||||||||||||=||| targets:289   AAUCACUCUACCACCAAGUCGGGUA   313 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:25   CUGGUGAGCUGGUGGUUCAGCUCAU   1   ||=|||||*|||||||||*|||||| targets:683   GAUCACUCUACCACCAAGCCGAGUA   707 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget