ncRNA ID | novel_gar_miR98 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:115581230-115581325 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029588;SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 73 - AAAGGAAUAUUCGAUUGCUUUGAA - 96 |
Stem-loop(if miRNA) |
--     -        AU  C     A   ACAA A     CAA   AGC   AAAGG AAUAUUCG  UG UUUGA CAA    G AAUCA   CCC   A   ||||| ||||||||  || ||||| |||    | |||||   |||   C   UUUCC UUAUGAGC  AC AAACU GUU    C UUAGU   GGG   G UG     G        -C  -     -   AAGC C     -AC   AUA |
Stem-loop sequence | AAAGGAAUAUUCGAUUGCUUUGAACAAACAAGAAAUCACAACCCAGCACGAUAGGGCAUGAUUCCCGAAUUGUCAAACACCGAGUAUUGCCUUUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017749107.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108451414 (LOC108451414), mRNA | uncharacterized LOC108451414(LOC108451414) | coding protein | psRNATarget |