| ncRNA ID | novel_gar_miR95 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr6:119728313-119728515 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029587;SRR1029588;SRR1029586 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - CAAGUUAGGCCCUGAACUUGG - 21 |
| Stem-loop(if miRNA) |
--CA G A - A C UU A -----A U UGU -U AAG AGUUAGGCCCU AACUUGGUA UU UUCCCACAUUG GG UUGAACUUUUUU UGUCUAAAUUAGUCC UGA CUUGG AAU UCCUA GUU G ||||||||||| ||||||||| || ||||||||||| || |||||||||||| ||||||||||||||| ||| ||||| ||| ||||| ||| UUAAUUUGGGA UUGAAUCAU AA AAGGGUGUAAC CC AACUUGAAAAAA ACAGGUUUAAUCAGG ACU GAACU UUG AGGAU CAA U AGAG A C C C A -- A AUAAAG - --- UU AUC |
| Stem-loop sequence | CAAGUUAGGCCCUGAACUUGGUAAUUUUCCCACAUUGAGGCUUGAACUUUUUUUUUGUCUAAAUUAGUCCAUGAACUUGGUAAUUGUUCCUAUGUUAAGGUCUAAACUUUAGGAGUUUCAAGGAAAUAUCAAGGACUAAUUUGGACAAAAAAAGUUCAAACCCCAAUGUGGGAACAACUACUAAGUUAAGGGUUUAAUUGAGA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017759793.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108460338 (LOC108460338), mRNA | uncharacterized LOC108460338(LOC108460338) | coding protein | psRNATarget |