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BaseInfo

ncRNA ID	novel_gar_miR91
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr1:21645455-21645560 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029586
Length	24
Mature sequence(if miRNA)	83 - UUGAACGCAGUGUAGUUUUCGAUC - 106
Stem-loop(if miRNA)	--     - G  G           ---A       UCG     ----U   G    AU   UUGAA C CA UGUAGUUUUCG    UCAAAUG   GUGAU     CCU CGAU  U   ||||| | || |||||||||||    |||||||   |||||     ||| ||||   GACUU G GU ACGUCGGGAGC    GGUUUAC   UACUG     GGA GUUA  C AG     C -  G           AUAG       -CA     UGUUU   G    CG
Stem-loop sequence	UUGAACGCAGUGUAGUUUUCGAUCAAAUGUCGGUGAUUCCUGCGAUAUUCGCAUUGGAGGUUUGUGUCAUACCAUUUGGGAUACGAGGGCUGCAGUGGCUUCAGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017792080.1	ncRNA:24   CUAGCUUUUGAUGUGACGCAAGUU   1   *||=|||||||=|||||||||||| targets:294   UAUUGAAAACUGCACUGCGUUCAA   317 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum uncharacterized LOC108487706 (LOC108487706), mRNA	uncharacterized LOC108487706(LOC108487706)	coding protein	psRNATarget
XM_017753673.1	ncRNA:24   CUAGCUUUUGAUGUGACGCAAGUU   1   *|||*||||||=|||||||||||| targets:570   AAUCAAAAACUGCACUGCGUUCAA   593 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum uncharacterized LOC108455059 (LOC108455059), mRNA	uncharacterized LOC108455059(LOC108455059)	coding protein	psRNATarget
XM_017754665.1	ncRNA:24   CUAGCUUUUGAUGUGACGCAAGUU   1   |*||*|||*||||||||||||||= targets:3078   GUUCUAAAUCUACACUGCGUUCAG   3101 Target Full Sequence	2.0	PREDICTED: Gossypium arboreum uncharacterized LOC108456070 (LOC108456070), mRNA	uncharacterized LOC108456070(LOC108456070)	coding protein	psRNATarget
XM_017762078.1	ncRNA:24   CUAGCUUUUGAUGUGACGCAAGUU   1   *||||||||=|=|||||||||||| targets:144   AAUCGAAAAUUGCACUGCGUUCAA   167 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum uncharacterized LOC108462080 (LOC108462080), mRNA	uncharacterized LOC108462080(LOC108462080)	coding protein	psRNATarget