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BaseInfo

ncRNA ID novel_gar_miR88
Species Gossypium arboreum
Class miRNA
Genome position Chr10:105371913-105372043 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - CGACUUUGGGCUAACGGAGCGGAG - 24
Stem-loop(if miRNA) --       GG   -A         AGA   UUAAA -     -    --G   A   -    -AU   GC
  CGACUUU  GCU  ACGGAGCGG   UCU     G CUAUG UCUG   UGU GCC CCGA   GUG  G
  |||||||  |||  |||||||||   |||     | ||||| ||||   ||| ||| ||||   |||
  GUUGAAG  CGA  UGUCUCGUC   AGG     C GGUAU AGGC   AUA CGG GGUU   UAU  G
AA       -A   GG         ---   UUCAG A     U    AAG   C   A    GGU   AA
Stem-loop sequence CGACUUUGGGCUAACGGAGCGGAGAUCUUUAAAGCUAUGUCUGGUGUAGCCCCGAAUGUGGCGGAAUAUUGGUUGGAGGCCAUAGAACGGAUUAUGGACGACUUGGACUGCUCUGUGGAGCAGAAGUUGAA