ncRNA ID | novel_gar_miR88 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:105371913-105372043 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CGACUUUGGGCUAACGGAGCGGAG - 24 |
Stem-loop(if miRNA) |
--       GG   -A         AGA   UUAAA -     -    --G   A   -    -AU   GC   CGACUUU  GCU  ACGGAGCGG   UCU     G CUAUG UCUG   UGU GCC CCGA   GUG  G   |||||||  |||  |||||||||   |||     | ||||| ||||   ||| ||| ||||   |||   GUUGAAG  CGA  UGUCUCGUC   AGG     C GGUAU AGGC   AUA CGG GGUU   UAU  G AA       -A   GG         ---   UUCAG A     U    AAG   C   A    GGU   AA |
Stem-loop sequence | CGACUUUGGGCUAACGGAGCGGAGAUCUUUAAAGCUAUGUCUGGUGUAGCCCCGAAUGUGGCGGAAUAUUGGUUGGAGGCCAUAGAACGGAUUAUGGACGACUUGGACUGCUCUGUGGAGCAGAAGUUGAA |