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BaseInfo

ncRNA ID novel_gar_miR85
Species Gossypium arboreum
Class miRNA
Genome position Chr6:106041774-106041896 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587;SRR1029588;SRR1029586
Length 21
Mature sequence(if miRNA) 103 - CAUGGCCUUUAGCGACGCUUU - 123
Stem-loop(if miRNA) --   AC       A        C          --G   G G G   AG G        A  G
  AGC  CGCUAAA GUCAUGGC UUUUGGUGGC   UUU U G AGA  C CCACUAAA GU A
  |||  ||||||| |||||||| ||||||||||   ||| | | |||  | |||||||| ||
  UCG  GCGAUUU CGGUACUG AAAAUCGCCG   AGA G U UUU  G GGUGAUUU CG U
UU   CA       C        -          AGA   G G G   -A -        C  A
Stem-loop sequence AGCACCGCUAAAAGUCAUGGCCUUUUGGUGGCGUUUGUGGGAGAAGCGCCACUAAAAGUGAUAGCCUUUAGUGGGAUUUGUGGGAGAAGAGCCGCUAAAAGUCAUGGCCUUUAGCGACGCUUU