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BaseInfo

ncRNA ID novel_gar_miR84
Species Gossypium arboreum
Class miRNA
Genome position Chr6:10251504-10251679 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 153 - AUACUUACUGCGGAUGAAGUAUGA - 176
Stem-loop(if miRNA) --           -  AU                                      -             A   UUUU  C   UU     A
  AUACUUCAUCC CG  UAAGUAUGUGAAAGGUAUUUAUGUUGGUACAUUGAUUU GGUUAUUAAGUCU UCA    GG AUG  UUAGA G
  ||||||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    || |||  |||||
  UAUGAAGUAGG GU  AUUCAUACACUUUCCAUAAAUACAACCAUGUAACUAAA CCAAUAAUUCAGA AGU    UU UGC  AAUUU U
AG           C  -C                                      A             -   ---U  A   -U     G
Stem-loop sequence AUACUUCAUCCCGAUUAAGUAUGUGAAAGGUAUUUAUGUUGGUACAUUGAUUUGGUUAUUAAGUCUAUCAUUUUGGCAUGUUUUAGAAGUGUUUAAUCGUAUUUUGAAGACUUAAUAACCAAAAUCAAUGUACCAACAUAAAUACCUUUCACAUACUUACUGCGGAUGAAGUAUGA