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BaseInfo

ncRNA ID	ath-miRf10949-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - UACUCGACCUGGUGGUCGAAUGGU - NA
Stem-loop(if miRNA)	-UU           G U      A   UCU   GAGG AUGUC   CUACUCGACCU G GGUCGA UGG   GUU    U |||||   ||||||||||| | |||||| |||   ||| UACAG   GGUGAGCUGGG C CCAGCU AUC   CGA    C      UUU           A U      C   -UU   AGUU
Stem-loop sequence	AUGUCUUCUACUCGACCUGGUGGUCGAAUGGUCUGUUGAGGUCUUGAAGCUUCUACUCGACCUCAGGGUCGAGUGGUUUGACAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183194.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   ||||*||||||||||||||||||| targets:448   ACCACUCGACCACCAGGUCGAGUA   471 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   ||||*|||||*||||||||||||| targets:807   ACCACUCGACAACCAGGUCGAGUA   830 Target Full Sequence	1.0	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   ||||*||||||*|||||||||||| targets:1103   ACCACUCGACCCCCAGGUCGAGUA   1126 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
EF183042.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   ||||*||||||||*|||||||||| targets:1525   ACCACUCGACCACGAGGUCGAGUA   1548 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   ||||*||||||||*|||||||||= targets:1149   ACCACUCGACCACGAGGUCGAGUG   1172 Target Full Sequence	2.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT012022.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   |=||*||*||||*||||||||||| targets:33   AUCACUCUACCAACAGGUCGAGUA   56 Target Full Sequence	2.5	Arabidopsis thaliana At2g10890 mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   |=||*||*||||*||||||||||| targets:316   AUCACUCUACCAACAGGUCGAGUA   339 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   |=||*||*||||*||||||||||| targets:364   AUCACUCUACCAACAGGUCGAGUA   387 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   |=||*||*||||*||||||||||| targets:412   AUCACUCUACCAACAGGUCGAGUA   435 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   |=||*||*|||||||*|||||||| targets:655   AUCACUCUACCACCAAGUCGAGUA   678 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   |=||*||*||||*||||||||||| targets:691   AUCACUCUACCAACAGGUCGAGUA   714 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   |=||*||*||||*||||||||||| targets:739   AUCACUCUACCAACAGGUCGAGUA   762 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   |=||*||*||||*||||||||||| targets:787   AUCACUCUACCAACAGGUCGAGUA   810 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   |=||*||*||||*||||||||||| targets:691   AUCACUCUACCAACAGGUCGAGUA   714 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   |=||*||*||||*||||||||||| targets:739   AUCACUCUACCAACAGGUCGAGUA   762 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   |=||*||*||||*||||||||||| targets:787   AUCACUCUACCAACAGGUCGAGUA   810 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   |=||*||*|||||||*|||||||| targets:1030   AUCACUCUACCACCAAGUCGAGUA   1053 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   ||||*||*|||||*|||||||||| targets:43   ACCACUCAACCACAAGGUCGAGUA   66 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:24   UGGUAAGCUGGUGGUCCAGCUCAU   1   |=||*||*||||*||||||||||| targets:144   AUCACUCUACCAACAGGUCGAGUA   167 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget