| ncRNA ID | novel_gar_miR79 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr5:41483913-41484029 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029587 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - UGAUCUCAACACUCGUAGAUGUCU - 24 |
| Stem-loop(if miRNA) |
-- C U C - ---U AGU UU CA UUA ACA CU UGGGUGUUGA GUCAU GC UCUUUUCGGA UAU GA UAUU A ||| || |||||||||| ||||| || |||||||||| ||| || |||| UGU GA GCUCACAACU UAGUA CG GGAAAAGUUU AUA CU AUAG U UC A U C A UAAU -GU UU UA UCU |
| Stem-loop sequence | ACACCUUUGGGUGUUGACGUCAUGCUUCUUUUCGGAAGUUAUUUGACAUAUUUUAAUUCUGAUAAUUCUUAUAUGUUUGAAAAGGUAAUGCAAUGAUCUCAACACUCGUAGAUGUCU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017765377.1 |
|
2.0 | PREDICTED: Gossypium arboreum transcription factor FAMA (LOC108465068), transcript variant X2, mRNA | transcription factor FAMA(LOC108465068) | coding protein | psRNATarget | |||||||||
| XM_017765376.1 |
|
2.0 | PREDICTED: Gossypium arboreum transcription factor FAMA (LOC108465068), transcript variant X1, mRNA | transcription factor FAMA(LOC108465068) | coding protein | psRNATarget |