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BaseInfo

ncRNA ID novel_gar_miR77
Species Gossypium arboreum
Class miRNA
Genome position Chr5:43083968-43084078 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - ACGGGUUACCUAGGUAGGCUCGGC - 24
Stem-loop(if miRNA) --     -          G G    -----C   AA     AA    AA  CUU     
  CGGGU UACCUGGGUA G UCGU      AGC  ACAGG  AGAG  AC   UGCUAA
  ||||| |||||||||| | ||||      |||  |||||  ||||  ||   |||||A
  GCUCG AUGGAUCCAU U GGCA      UUG  UGUUC  UUUU  UG   ACGAUA
CG     G          - G    UUUUUA   -A     CG    AG  UUU     
Stem-loop sequence CGGGUUACCUGGGUAGGGUCGUCAGCAAACAGGAAAGAGAAACCUUUGCUAAAAUAGCAUUUGUGAUUUUGCCUUGUAGUUAUUUUUACGGGUUACCUAGGUAGGCUCGGC