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BaseInfo

ncRNA ID novel_gar_miR73
Species Gossypium arboreum
Class miRNA
Genome position Chr10:77712139-77712192 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587;SRR1029586
Length 24
Mature sequence(if miRNA) 1 - AUCGGAUCUUGAGAAUGGUCGGUU - 24
Stem-loop(if miRNA) --    GAU   G       --    UUU
  AUCG   CUU AGAAUGG  UCGG   U
  ||||   ||| |||||||  ||||
  UAGU   GAA UUUUAUU  GGUU   U
UG    --U   G       UU    UUA
Stem-loop sequence AUCGGAUCUUGAGAAUGGUCGGUUUUUAUUUUGGUUUUAUUUUGAAGUUGAUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017786740.1
ncRNA:24   UUGGCUGGUAAGAGUUCUAGGCUA   1
  *|||-|||||*||||||||||*||
targets:1148   CACC-ACCAUGCUCAAGAUCCCAU   1170

2.5 PREDICTED: Gossypium arboreum protein LATERAL ROOT PRIMORDIUM 1-like (LOC108483376), mRNA protein LATERAL ROOT PRIMORDIUM 1-like(LOC108483376) coding protein psRNATarget