ncRNA ID | novel_gar_miR73 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:77712139-77712192 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCGGAUCUUGAGAAUGGUCGGUU - 24 |
Stem-loop(if miRNA) |
--    GAU   G       --    UUU   AUCG   CUU AGAAUGG  UCGG   U   ||||   ||| |||||||  ||||   UAGU   GAA UUUUAUU  GGUU   U UG    --U   G       UU    UUA |
Stem-loop sequence | AUCGGAUCUUGAGAAUGGUCGGUUUUUAUUUUGGUUUUAUUUUGAAGUUGAUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017786740.1 |
|
2.5 | PREDICTED: Gossypium arboreum protein LATERAL ROOT PRIMORDIUM 1-like (LOC108483376), mRNA | protein LATERAL ROOT PRIMORDIUM 1-like(LOC108483376) | coding protein | psRNATarget |