Search result

BaseInfo

ncRNA ID	ath-miRf10948-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CUUCUACUCGACCUGGUGGUCGA - NA
Stem-loop(if miRNA)	U   GC    -UU           G U      A   UCU   GAGG  GGU  UGUC   CUACUCGACCU G GGUCGA UGG   GUU    U  |||  ||||   ||||||||||| | |||||| |||   |||  CUA  ACAG   GGUGAGCUGGG C CCAGCU AUC   CGA    C A   GU    UUU           A U      C   -UU   AGUU
Stem-loop sequence	UGGUGCUGUCUUCUACUCGACCUGGUGGUCGAAUGGUCUGUUGAGGUCUUGAAGCUUCUACUCGACCUCAGGGUCGAGUGGUUUGACAUGAUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183194.1	ncRNA:23   AGCUGGUGGUCCAGCUCAUCUUC   1   ||||||||||||||||||||||| targets:453   UCGACCACCAGGUCGAGUAGAAG   475 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:23   AGCUGGUGGUCCAGCUCAUCUUC   1   ||||||*|||||||||||||||| targets:1108   UCGACCCCCAGGUCGAGUAGAAG   1130 Target Full Sequence	1.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
EF183042.1	ncRNA:23   AGCUGGUGGUCCAGCUCAUCUUC   1   ||||||||*|||||||||||=|| targets:1530   UCGACCACGAGGUCGAGUAGGAG   1552 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:23   AGCUGGUGGUCCAGCUCAUCUUC   1   ||*|||||*||||||||||||*| targets:48   UCAACCACAAGGUCGAGUAGACG   70 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget