| ncRNA ID | novel_gar_miR72 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr5:59079401-59079585 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029587;SRR1029588 |
| Length | 24 |
| Mature sequence(if miRNA) | 162 - AUGGAUUGUCACAUGGAUGACAUG - 185 |
| Stem-loop(if miRNA) |
--A U G G A A C UAU --- ----- U U A UGGAU GUCACAUG AUGACAU UCA CGUUUA UUAAAUUUU AAAAUUUUAAAA UAAAAA CUAUUUUU UUA AAUU UUAU C ||||| |||||||| ||||||| ||| |||||| ||||||||| |||||||||||| |||||| |||||||| ||| |||| |||| U ACCUA CGGUGUAC UACUGUG AGU GUAAAU GAUUUAAAA UUUUAAAAUUUU AUUUUU GAUAAAAA AAU UUAA AAUG A UAA U - A A - U --U UAA UUUUU U U U |
| Stem-loop sequence | AUGGAUUGUCACAUGGAUGACAUGUCAACGUUUAAUUAAAUUUUCAAAAUUUUAAAAUAUUAAAAACUAUUUUUUUAUAAUUUUUAUACUAUGUAAUAAUUUUAAUUUUUAAAAAUAGAAUUUUUUAUUUUUAAAAUUUUUAAAAUUUAGUAAAUGAUGAAGUGUCAUCAUGUGGCUAUCCAAAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017761912.1 |
|
2.5 | PREDICTED: Gossypium arboreum DEAD-box ATP-dependent RNA helicase 10-like (LOC108461930), transcript variant X1, mRNA | DEAD-box ATP-dependent RNA helicase 10-like(LOC108461930) | coding protein | psRNATarget | |||||||||
| XM_017761914.1 |
|
2.5 | PREDICTED: Gossypium arboreum DEAD-box ATP-dependent RNA helicase 10-like (LOC108461930), transcript variant X2, mRNA | DEAD-box ATP-dependent RNA helicase 10-like(LOC108461930) | coding protein | psRNATarget |