ncRNA ID | novel_gar_miR71 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr5:58872961-58873159 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029588;SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CAUACACAUGGACUGCUAUGUGGA - 24 |
Stem-loop(if miRNA) |
--       A    CU                A   A         AAU         -UU              -C   C      -U    ---U    ACU   CAUACAC UGGA  GCUAUGUGGAUGACAU UCA CAUUUAAUU   UUUUUAAAA   UUAAAAAUUAAAAA  UAU UUUUUA  AAUU    UUAU   U   ||||||| ||||  |||||||||||||||| ||| |||||||||   |||||||||   ||||||||||||||  ||| ||||||  ||||    ||||   GUAUGUG ACCU  CGGUGUAUCUACUGUG AGU GUAAAUUAA   AAAAAUUUU   AAUUUUUAAUUUUU  AUA AAAAAU  UUAA    AAUA   U UC       A    AU                G   A         ---         UUU              UU   U      UU    UUUU    AUU |
Stem-loop sequence | CAUACACAUGGACUGCUAUGUGGAUGACAUAUCAACAUUUAAUUAAUUUUUUAAAAUUUUAAAAAUUAAAAACUAUCUUUUUAUAAUUUUUAUACUUUUUAAUAAUUUUAAUUUUUAAAAAUAUAUUUUUUUAAUUUUUAAUUUUUUUAAAAAAAUUAAAUGAUGAGGUGUCAUCUAUGUGGCUAUCCAAGUGUAUGCU |