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BaseInfo

ncRNA ID	ath-miRf10947-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - UCGACCUCGGGGUCGAGUGGUG - NA
Stem-loop(if miRNA)	-     -          G           -   --G UG -AG   UG UGUCCU          A AUG AAGAC ACUCGACCUC GGGUCGAGUGG UGA   G  A   UGG  G      CUACUCGACC G ||| ||||| |||||||||| ||||||||||| |||   |  |   |||  |      |||||||||| UAC UUUUG UGAGCUGGAG UCCAGCUCAUC GCU   U  U   GUC  C      GGUGAGCUGG G    G     G          G           U   AAG GU GGA   GU -----U          G
Stem-loop sequence	AUGAAGACACUCGACCUCGGGGUCGAGUGGUGAGGUGAAGUGGUGGUGUCCUCUACUCGACCAGGGGGUCGAGUGGUCUGCUGAGGUUGUGAAUCGUCUACUCGACCUGGAGGUCGAGUGGUUUUGCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY227642.1	ncRNA:22   GUGGUGAGCUGGGGCUCCAGCU   1   |||||||||||||||||||||| targets:852   CACCACUCGACCCCGAGGUCGA   873 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:22   GUGGUGAGCUGGGGCUCCAGCU   1   ||=||||||||||||||||||| targets:1615   CAUCACUCGACCCCGAGGUCGA   1636 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:22   GUGGUGAGCUGGGGCUCCAGCU   1   *|*||||||||||||||||||| targets:1057   AAGCACUCGACCCCGAGGUCGA   1078 Target Full Sequence	0.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
AY227642.1	ncRNA:22   GUGGUGAGCUGGGGCUCCAGCU   1   *||||||||||||*|||||||| targets:761   AACCACUCGACCCAGAGGUCGA   782 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:22   GUGGUGAGCUGGGGCUCCAGCU   1   *|||||||||||*||||||||| targets:1524   AACCACUCGACCACGAGGUCGA   1545 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:22   GUGGUGAGCUGGGGCUCCAGCU   1   ||||||||||||*||||||||| targets:1148   CACCACUCGACCACGAGGUCGA   1169 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_103391.1	ncRNA:22   GUGGUGAGCUGGGGCUCCAGCU   1   *|||||||||||||*||||||| targets:1102   GACCACUCGACCCCCAGGUCGA   1123 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_103391.1	ncRNA:22   GUGGUGAGCUGGGGCUCCAGCU   1   *||||||||||||||*|||||| targets:1207   AACCACUCGACCCCGUGGUCGA   1228 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
AY231407.1	ncRNA:22   GUGGUGAGCUGGGGCUCCAGCU   1   *||||||||||||||*|||||| targets:487   GACCACUCGACCCCGUGGUCGA   508 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
EF183005.1	ncRNA:22   GUGGUGAGCUGGGGCUCCAGCU   1   *=*|||||||||=||||||||| targets:1862   AGGCACUCGACCUCGAGGUCGA   1883 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget