ncRNA ID | novel_gar_miR57 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr5:2305022-2305165 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 121 - AUUUGACGUCUCUGUAGCGGCGGA - 144 |
Stem-loop(if miRNA) |
--U     G       - -      GAAG  AACA      G --G  U    AGCG       -  -     GAAG    GUUGC GCAGAGA G CAGAUC    AU    GAUUUG C   UC CUGU    GCGGAGA GC AGAUC    A    ||||| ||||||| | ||||||    ||    |||||| |   || ||||    ||||||| || |||||    CGGCG UGUCUCU C GUUUAG    UA    CUAGAC G   AG GGCG    UGUCUCU CG UUUAG    U AGG     A       G A      ACGA  GAAG      - AAA  C    ---A       A  G     ACAA |
Stem-loop sequence | UGUUGCGGCAGAGAGCAGAUCGAAGAUAACAGAUUUGGCGUCUCUGUAGCGGCGGAGAGCAGAUCGAAGAUAACAGAUUUGGCAUCUCUGUAGCGGCGAAAAGCAGAUCGAAGAUAGCAGAUUUGACGUCUCUGUAGCGGCGGA |