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BaseInfo

ncRNA ID novel_gar_miR55
Species Gossypium arboreum
Class miRNA
Genome position Chr5:5014790-5014877 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - UGACACACGGGCGUGUAGCUUGGC - 24
Stem-loop(if miRNA) --  C  G     G         ---  U       UCUAAA     C
  CA GU ACAUG UCGUGUGUC   CC UGUAAUU      GGUUU A
  || || ||||| |||||||||   || |||||||      ||||| A
  GU CG UGUGC GGCACACAG   GG ACAUUGA      UCGAA G
CG  U  A     G         UCC  C       ------     U
Stem-loop sequence CACGUGACAUGGUCGUGUGUCCCUUGUAAUUUCUAAAGGUUUCAAGUAAGCUAGUUACACGGCCUGACACACGGGCGUGUAGCUUGGC