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BaseInfo

ncRNA ID novel_gar_miR51
Species Gossypium arboreum
Class miRNA
Genome position Chr5:8368075-8368246 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 23
Mature sequence(if miRNA) 150 - GAUCAGAUCAACUGAUUGGAUUG - 172
Stem-loop(if miRNA) --    -    -       UU     G          GAAGUAUCAAUU   --A      GAUU         -  A    A UAAAAAA
  GAUC AGAU CAACUGA  GGAUU AGAAUUGAUU            UGA   GGAAAA    GAACCAAUU GA UCAU C       U
  |||| |||| |||||||  ||||| ||||||||||            |||   ||||||    ||||||||| || |||| |
  CUGG UUUA GUUGGCU  UUUGA UUUUGAUUAG            ACU   UCUUUU    UUUGGUUGA CU AGUG G       U
UA    G    U       --     G          ---AUUAACUUU   GUA      AAAU         G  A    A UAACUUG
Stem-loop sequence GAUCAGAUCAACUGAUUGGAUUGAGAAUUGAUUGAAGUAUCAAUUUGAAGGAAAAGAUUGAACCAAUUGAAUCAUACUAAAAAAUUGUUCAAUGAGUGAAUCGAGUUGGUUUUAAAUUUUCUAUGUCAUUUCAAUUAGAUUAGUUUUGAGUUUUCGGUUGUAUUUGGGUCAU