| ncRNA ID | novel_gar_miR49 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr5:10233577-10233665 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029587;SRR1029588;SRR3180715;SRR3180719;SRR3180720;SRR3180721 |
| Length | 22 |
| Mature sequence(if miRNA) | 68 - ACUCUCCCUCAAGGGCUUCCCC - 89 |
| Stem-loop(if miRNA) |
-- C C - -G GCA U U ACUCUCCCU AAGGGCUUC CCAA CAU CCAU UG GGGC U ||||||||| ||||||||| |||| ||| |||| || |||| G UGAGGGGGA UUCCUGAAG GGUU GUA GGUA AC UUCG A GG - U C AA --G - U |
| Stem-loop sequence | ACUCUCCCUCAAGGGCUUCCCCAACAUGCCAUGCAUGUGGGCUUGAUGCUUCAGAUGGAAAUGCUUGGUGAAGUCCUUAGGGGGAGUGG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017754868.1 |
|
2.5 | PREDICTED: Gossypium arboreum DELLA protein RGL1-like (LOC108456273), mRNA | DELLA protein RGL1-like(LOC108456273) | coding protein | psRNATarget | |||||||||
| XM_017763420.1 |
|
2.5 | PREDICTED: Gossypium arboreum replication factor C subunit 3-like (LOC108463488), mRNA | replication factor C subunit 3-like(LOC108463488) | coding protein | psRNATarget |