ncRNA ID | novel_gar_miR48 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr5:10238563-10238658 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029588;SRR3180715;SRR3180719;SRR1029586;SRR3180720;SRR3180721 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CGAAGUCCUUAGGGGGGGUGC - 21 |
Stem-loop(if miRNA) |
--         C         C    -   -GA  --    U   GCU   U   ACUCUCCCU AAGGGCUUC CCAA CAU   CA  UGCA GGU   AGC U   ||||||||| ||||||||| |||| |||   ||  |||| |||   ||| A   UGGGGGGGA UUCCUGAAG GGUU GUA   GU  ACGU CCG   UCG A CG         -         C    C   AAG  AU    -   ---   U |
Stem-loop sequence | ACUCUCCCUCAAGGGCUUCCCCAACAUGACAUGCAUGGUGCUAGCUUAAUGCUGCCUGCAUAUGGAAAUGCUUGGCGAAGUCCUUAGGGGGGGUGC |