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BaseInfo

ncRNA ID novel_gar_miR48
Species Gossypium arboreum
Class miRNA
Genome position Chr5:10238563-10238658 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587;SRR1029588;SRR3180715;SRR3180719;SRR1029586;SRR3180720;SRR3180721
Length 21
Mature sequence(if miRNA) 1 - CGAAGUCCUUAGGGGGGGUGC - 21
Stem-loop(if miRNA) --         C         C    -   -GA  --    U   GCU   U
  ACUCUCCCU AAGGGCUUC CCAA CAU   CA  UGCA GGU   AGC U
  ||||||||| ||||||||| |||| |||   ||  |||| |||   ||| A
  UGGGGGGGA UUCCUGAAG GGUU GUA   GU  ACGU CCG   UCG A
CG         -         C    C   AAG  AU    -   ---   U
Stem-loop sequence ACUCUCCCUCAAGGGCUUCCCCAACAUGACAUGCAUGGUGCUAGCUUAAUGCUGCCUGCAUAUGGAAAUGCUUGGCGAAGUCCUUAGGGGGGGUGC