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BaseInfo

ncRNA ID	novel_gar_miR44
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr5:18076343-18076405 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029587
Length	24
Mature sequence(if miRNA)	1 - UUUGGGUUUUGAGCAUAGGGGCAG - 24
Stem-loop(if miRNA)	GUACU  G  G  AC    UGAAUUUUGGGCCU      UG CU UA  GGCC              A      || || ||  ||||      AC GG AU  CGAG              G ----G  G  G  -A    UUUUGGGUUUUGAA
Stem-loop sequence	GUACUUGGCUGUAACGGCCUGAAUUUUGGGCCUAGAAGUUUUGGGUUUUGAGCAUAGGGGCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017775413.1	ncRNA:24   GACGGGGAUACGAGUUUUGGGUUU   1   *|*|=||*||*||||||||||||| targets:613   AUCCUCCAAUCCUCAAAACCCAAA   636 Target Full Sequence	2.0	PREDICTED: Gossypium arboreum uncharacterized LOC108473703 (LOC108473703), mRNA	uncharacterized LOC108473703(LOC108473703)	coding protein	psRNATarget
XM_017772059.1	ncRNA:24   GACGGGGAUACGAGUUUUGGGUUU   1   ||*=||=|*|*||||||||||||| targets:336   CUUUCCUUCUCCUCAAAACCCAAA   359 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum uncharacterized LOC108470661 (LOC108470661), transcript variant X5, mRNA	uncharacterized LOC108470661(LOC108470661)	coding protein	psRNATarget
XM_017772058.1	ncRNA:24   GACGGGGAUACGAGUUUUGGGUUU   1   ||*=||=|*|*||||||||||||| targets:336   CUUUCCUUCUCCUCAAAACCCAAA   359 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum uncharacterized LOC108470661 (LOC108470661), transcript variant X4, mRNA	uncharacterized LOC108470661(LOC108470661)	coding protein	psRNATarget
XM_017772057.1	ncRNA:24   GACGGGGAUACGAGUUUUGGGUUU   1   ||*=||=|*|*||||||||||||| targets:335   CUUUCCUUCUCCUCAAAACCCAAA   358 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum uncharacterized LOC108470661 (LOC108470661), transcript variant X3, mRNA	uncharacterized LOC108470661(LOC108470661)	coding protein	psRNATarget
XM_017772056.1	ncRNA:24   GACGGGGAUACGAGUUUUGGGUUU   1   ||*=||=|*|*||||||||||||| targets:335   CUUUCCUUCUCCUCAAAACCCAAA   358 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum uncharacterized LOC108470661 (LOC108470661), transcript variant X2, mRNA	uncharacterized LOC108470661(LOC108470661)	coding protein	psRNATarget
XM_017772060.1	ncRNA:24   GACGGGGAUACGAGUUUUGGGUUU   1   ||*=||=|*|*||||||||||||| targets:337   CUUUCCUUCUCCUCAAAACCCAAA   360 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum uncharacterized LOC108470661 (LOC108470661), transcript variant X6, mRNA	uncharacterized LOC108470661(LOC108470661)	coding protein	psRNATarget
XM_017772055.1	ncRNA:24   GACGGGGAUACGAGUUUUGGGUUU   1   ||*=||=|*|*||||||||||||| targets:335   CUUUCCUUCUCCUCAAAACCCAAA   358 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum uncharacterized LOC108470661 (LOC108470661), transcript variant X1, mRNA	uncharacterized LOC108470661(LOC108470661)	coding protein	psRNATarget