ncRNA ID | novel_gar_miR42 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:68993720-68993864 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGUACUGAGCUCGUUCUGGCAUA - 24 |
Stem-loop(if miRNA) |
-AU   -C    C       --    -    UUU  -     -    ---UGUUCUC   UU UGCAUCCACCAUUC    GUA  UGAG UCGUUCU  GGCA UAGU   GG UUUAU CGUG          GAU  A              A    |||  |||| |||||||  |||| ||||   || ||||| ||||          |||  |              U    CGU  ACUC AGUAAGA  UCGU AUCG   CC GGAUA GUAC          CGA  G              C CUU   AU    -       GU    C    UCU  U     A    UUCUACCUUC   -U UUUAACUCCUCGAU |
Stem-loop sequence | AUGUACUGAGCUCGUUCUGGCAUAGUUUUGGUUUAUCGUGUGUUCUCGAUUUAUGCAUCCACCAUUCAUCUAGCUCCUCAAUUUGUAGCCUUCCAUCUUCAUGAAUAGGUCCUCUGCUACUGCUUGAGAAUGACUCAUAUGCUUC |