Search result

BaseInfo

ncRNA ID novel_gar_miR42
Species Gossypium arboreum
Class miRNA
Genome position Chr10:68993720-68993864 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - AUGUACUGAGCUCGUUCUGGCAUA - 24
Stem-loop(if miRNA) -AU   -C    C       --    -    UUU  -     -    ---UGUUCUC   UU UGCAUCCACCAUUC
   GUA  UGAG UCGUUCU  GGCA UAGU   GG UUUAU CGUG          GAU  A              A
   |||  |||| |||||||  |||| ||||   || ||||| ||||          |||  |              U
   CGU  ACUC AGUAAGA  UCGU AUCG   CC GGAUA GUAC          CGA  G              C
CUU   AU    -       GU    C    UCU  U     A    UUCUACCUUC   -U UUUAACUCCUCGAU
Stem-loop sequence AUGUACUGAGCUCGUUCUGGCAUAGUUUUGGUUUAUCGUGUGUUCUCGAUUUAUGCAUCCACCAUUCAUCUAGCUCCUCAAUUUGUAGCCUUCCAUCUUCAUGAAUAGGUCCUCUGCUACUGCUUGAGAAUGACUCAUAUGCUUC